RStudio crashing on Ubuntu
My RStudio has suddenly started to crash when opening a file (R or Rmd).
I get this weird pop-up and I have to force kill it. This error also pretty much freezes all other open applications like browsers.
RStudio opens up fine. I can run code in the console and that works. I can create a new file and run code from there. But, if I try to save that file, then it gives this error. So far it's only when I save or open R/Rmd files. R through the terminal works perfectly fine too.
This started yesterday when I filled up my disk and ran out of space. Then I couldn't save anymore obviously. Since then I have cleared space on my drive. There is 35GB of free space on my drive. And the system has been rebooted.
I have tried to remove the .rstudio-desktop directory from my home. That didn't help. Then I uninstalled and reinstalled RStudio. That didn't help either. Anyone has any ideas?
R version 3.5.2 (2018-12-20)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.2 LTS
RStudio Version 1.1.463 – © 2009-2018 RStudio, Inc.
Mozilla/5.0 (X11; Linux x86_64)
AppleWebKit/538.1 (KHTML, like Gecko)
RStudio Safari/538.1 Qt/5.4.0
EDIT: Error logs added as suggested.
Ran journalctl -f and got as below:
Mar 15 14:41:05 elmo systemd[1]: Starting Process error reports when automatic reporting is enabled...
Mar 15 14:41:05 elmo whoopsie-upload-all[14945]: ERROR: whoopsie is not running
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Main process exited, code=exited, status=1/FAILURE
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Failed with result 'exit-code'.
Mar 15 14:41:05 elmo systemd[1]: Failed to start Process error reports when automatic reporting is enabled.
Ran rstudio from the command line and got below:
load glyph failed err=6 face=0x2372ac0, glyph=2798
load glyph failed err=6 face=0x2372ac0, glyph=2798
[1] 14976 killed rstudio
Rstudio crashed and was killed in both cases above.
r rstudio
asked Mar 15 at 13:30
rmfrmf
1034
add a comment |
My RStudio has suddenly started to crash when opening a file (R or Rmd).
I get this weird pop-up and I have to force kill it. This error also pretty much freezes all other open applications like browsers.
RStudio opens up fine. I can run code in the console and that works. I can create a new file and run code from there. But, if I try to save that file, then it gives this error. So far it's only when I save or open R/Rmd files. R through the terminal works perfectly fine too.
This started yesterday when I filled up my disk and ran out of space. Then I couldn't save anymore obviously. Since then I have cleared space on my drive. There is 35GB of free space on my drive. And the system has been rebooted.
I have tried to remove the .rstudio-desktop directory from my home. That didn't help. Then I uninstalled and reinstalled RStudio. That didn't help either. Anyone has any ideas?
R version 3.5.2 (2018-12-20)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.2 LTS
RStudio Version 1.1.463 – © 2009-2018 RStudio, Inc.
Mozilla/5.0 (X11; Linux x86_64)
AppleWebKit/538.1 (KHTML, like Gecko)
RStudio Safari/538.1 Qt/5.4.0
EDIT: Error logs added as suggested.
Ran journalctl -f and got as below:
Mar 15 14:41:05 elmo systemd[1]: Starting Process error reports when automatic reporting is enabled...
Mar 15 14:41:05 elmo whoopsie-upload-all[14945]: ERROR: whoopsie is not running
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Main process exited, code=exited, status=1/FAILURE
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Failed with result 'exit-code'.
Mar 15 14:41:05 elmo systemd[1]: Failed to start Process error reports when automatic reporting is enabled.
Ran rstudio from the command line and got below:
load glyph failed err=6 face=0x2372ac0, glyph=2798
load glyph failed err=6 face=0x2372ac0, glyph=2798
[1] 14976 killed rstudio
Rstudio crashed and was killed in both cases above.
r rstudio
asked Mar 15 at 13:30
rmfrmf
1034
runjournalctl -fand see its output when rstudio crashes. Alternatively open a terminal and run rstudio from there, when it inevitably crashes, check the output there as well
– j-money
Mar 15 at 13:33
please edit your original post and add this information to it, so we don't have to search through the comments for useful information
– j-money
Mar 15 at 13:48
What is your desktop environment? What is your video card and its driver? Are you running Wayland? What is your Ubuntu version?
– N0rbert
Mar 15 at 20:24
Ubuntu 18.04.2 with gnome desktop. Not sure what Wayland is, but I am probably not running it.
– rmf
Mar 15 at 21:54
add a comment |
My RStudio has suddenly started to crash when opening a file (R or Rmd).
I get this weird pop-up and I have to force kill it. This error also pretty much freezes all other open applications like browsers.
RStudio opens up fine. I can run code in the console and that works. I can create a new file and run code from there. But, if I try to save that file, then it gives this error. So far it's only when I save or open R/Rmd files. R through the terminal works perfectly fine too.
This started yesterday when I filled up my disk and ran out of space. Then I couldn't save anymore obviously. Since then I have cleared space on my drive. There is 35GB of free space on my drive. And the system has been rebooted.
I have tried to remove the .rstudio-desktop directory from my home. That didn't help. Then I uninstalled and reinstalled RStudio. That didn't help either. Anyone has any ideas?
R version 3.5.2 (2018-12-20)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.2 LTS
RStudio Version 1.1.463 – © 2009-2018 RStudio, Inc.
Mozilla/5.0 (X11; Linux x86_64)
AppleWebKit/538.1 (KHTML, like Gecko)
RStudio Safari/538.1 Qt/5.4.0
EDIT: Error logs added as suggested.
Ran journalctl -f and got as below:
Mar 15 14:41:05 elmo systemd[1]: Starting Process error reports when automatic reporting is enabled...
Mar 15 14:41:05 elmo whoopsie-upload-all[14945]: ERROR: whoopsie is not running
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Main process exited, code=exited, status=1/FAILURE
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Failed with result 'exit-code'.
Mar 15 14:41:05 elmo systemd[1]: Failed to start Process error reports when automatic reporting is enabled.
Ran rstudio from the command line and got below:
load glyph failed err=6 face=0x2372ac0, glyph=2798
load glyph failed err=6 face=0x2372ac0, glyph=2798
[1] 14976 killed rstudio
Rstudio crashed and was killed in both cases above.
r rstudio
asked Mar 15 at 13:30
rmfrmf
1034
My RStudio has suddenly started to crash when opening a file (R or Rmd).
I get this weird pop-up and I have to force kill it. This error also pretty much freezes all other open applications like browsers.
RStudio opens up fine. I can run code in the console and that works. I can create a new file and run code from there. But, if I try to save that file, then it gives this error. So far it's only when I save or open R/Rmd files. R through the terminal works perfectly fine too.
This started yesterday when I filled up my disk and ran out of space. Then I couldn't save anymore obviously. Since then I have cleared space on my drive. There is 35GB of free space on my drive. And the system has been rebooted.
I have tried to remove the .rstudio-desktop directory from my home. That didn't help. Then I uninstalled and reinstalled RStudio. That didn't help either. Anyone has any ideas?
R version 3.5.2 (2018-12-20)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.2 LTS
RStudio Version 1.1.463 – © 2009-2018 RStudio, Inc.
Mozilla/5.0 (X11; Linux x86_64)
AppleWebKit/538.1 (KHTML, like Gecko)
RStudio Safari/538.1 Qt/5.4.0
EDIT: Error logs added as suggested.
Ran journalctl -f and got as below:
Mar 15 14:41:05 elmo systemd[1]: Starting Process error reports when automatic reporting is enabled...
Mar 15 14:41:05 elmo whoopsie-upload-all[14945]: ERROR: whoopsie is not running
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Main process exited, code=exited, status=1/FAILURE
Mar 15 14:41:05 elmo systemd[1]: apport-autoreport.service: Failed with result 'exit-code'.
Mar 15 14:41:05 elmo systemd[1]: Failed to start Process error reports when automatic reporting is enabled.
Ran rstudio from the command line and got below:
load glyph failed err=6 face=0x2372ac0, glyph=2798
load glyph failed err=6 face=0x2372ac0, glyph=2798
[1] 14976 killed rstudio
Rstudio crashed and was killed in both cases above.
r rstudio
r rstudio
asked Mar 15 at 13:30
rmfrmf
1034
asked Mar 15 at 13:30
rmfrmf
1034
edited Mar 15 at 14:02
rmf
asked Mar 15 at 13:30
rmfrmf
1034
asked Mar 15 at 13:30
rmfrmf
1034
asked Mar 15 at 13:30
rmfrmf
1034
1034
runjournalctl -fand see its output when rstudio crashes. Alternatively open a terminal and run rstudio from there, when it inevitably crashes, check the output there as well
– j-money
Mar 15 at 13:33
please edit your original post and add this information to it, so we don't have to search through the comments for useful information
– j-money
Mar 15 at 13:48
What is your desktop environment? What is your video card and its driver? Are you running Wayland? What is your Ubuntu version?
– N0rbert
Mar 15 at 20:24
Ubuntu 18.04.2 with gnome desktop. Not sure what Wayland is, but I am probably not running it.
– rmf
Mar 15 at 21:54
add a comment |
runjournalctl -fand see its output when rstudio crashes. Alternatively open a terminal and run rstudio from there, when it inevitably crashes, check the output there as well
– j-money
Mar 15 at 13:33
please edit your original post and add this information to it, so we don't have to search through the comments for useful information
– j-money
Mar 15 at 13:48
What is your desktop environment? What is your video card and its driver? Are you running Wayland? What is your Ubuntu version?
– N0rbert
Mar 15 at 20:24
Ubuntu 18.04.2 with gnome desktop. Not sure what Wayland is, but I am probably not running it.
– rmf
Mar 15 at 21:54
run
journalctl -f and see its output when rstudio crashes. Alternatively open a terminal and run rstudio from there, when it inevitably crashes, check the output there as well– j-money
Mar 15 at 13:33
run
journalctl -f and see its output when rstudio crashes. Alternatively open a terminal and run rstudio from there, when it inevitably crashes, check the output there as well– j-money
Mar 15 at 13:33
please edit your original post and add this information to it, so we don't have to search through the comments for useful information
– j-money
Mar 15 at 13:48
please edit your original post and add this information to it, so we don't have to search through the comments for useful information
– j-money
Mar 15 at 13:48
What is your desktop environment? What is your video card and its driver? Are you running Wayland? What is your Ubuntu version?
– N0rbert
Mar 15 at 20:24
What is your desktop environment? What is your video card and its driver? Are you running Wayland? What is your Ubuntu version?
– N0rbert
Mar 15 at 20:24
Ubuntu 18.04.2 with gnome desktop. Not sure what Wayland is, but I am probably not running it.
– rmf
Mar 15 at 21:54
Ubuntu 18.04.2 with gnome desktop. Not sure what Wayland is, but I am probably not running it.
– rmf
Mar 15 at 21:54
add a comment |
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run
journalctl -fand see its output when rstudio crashes. Alternatively open a terminal and run rstudio from there, when it inevitably crashes, check the output there as well– j-money
Mar 15 at 13:33
please edit your original post and add this information to it, so we don't have to search through the comments for useful information
– j-money
Mar 15 at 13:48
What is your desktop environment? What is your video card and its driver? Are you running Wayland? What is your Ubuntu version?
– N0rbert
Mar 15 at 20:24
Ubuntu 18.04.2 with gnome desktop. Not sure what Wayland is, but I am probably not running it.
– rmf
Mar 15 at 21:54